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Fig. 1 | Genome Medicine

Fig. 1

From: Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period

Fig. 1

Global comparison of the 2005 and 2016-7 collections. a Phylogroup distribution of the strains. b Distribution of the number of virulence factors per strain among the six main functional classes of virulence. c Bar chart of predicted phenotypes of the strains. The results are presented as percentage of resistant strains for nine antibiotics of clinical importance. d Distribution of the number of replicons per strain and the plasmid sequence length predicted by PlaScope [36]. e Bar chart of the number of strains carrying complete integron, CALIN (clusters of attC sites lacking integron-integrases), and In0 (integron integrase only). Significant differences are highlighted by asterisks. AMP, ampicillin; TZP, piperacillin/tazobactam; CTX/CAZ, cefotaxime/ceftazidime; FEP, cefepime; CARB, carbapenems; FQ, fluoroquinolones; GEN, gentamicin; AMK, amikacin; SXT, cotrimoxazole

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Genome Medicine

ISSN: 1756-994X

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