Skip to main content

Table 3 Viral mutation fingerprint comparisons

From: Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Patient

Private mutation1

Reported mutations2

Strict matching # genomes3

Relaxed matching # genomes4

Ratio relaxed criteria

P125

 

3037C>T, 23403A>G

17,851

43,943

5.806345E−01

P126

8084C>T

27641C>T

0

0

0.000000E+00

P128

 

3037C>T

66

61,952

8.185938E−01

P132

16876A>G

27970C>T

0

0

0.000000E+00

P133

 

3037C>T, 8389C>T, 23403A>

37

115

1.519536E−03

P137

 

27131C>T

1

15

1.982003E−04

P138

 

27925C>T

0

22

2.906938E−04

P139

 

27670G>T

1

34

4.492541E−04

P140

 

3037C>T

66

61,952

8.185938E−01

P142

 

16375C>T

0

16

2.114137E−04

P144

 

26625C>T, 27874C>T

0

0

0.000000E+00

P145

2721C>T

8092C>T, 17747C>T, 17858A>

18060C>T, 28144T>C

0

0

0.000000E+00

P146

 

26951G>T, 27874C>T

3

0

0.000000E+00

P151

 

21646C>T

0

257

3.395833E−03

P152

 

3037C>T, 22289G>T, 23403A>

4

9

1.189202E−04

P162

 

7482C>T

0

10

1.321336E−04

  1. 1Private mutations refer to those with a frequency less than 0.001%
  2. 2Mutation in bold are non-synonymous
  3. 3Strictly refers to other samples with the exact same number of mutations
  4. 4Relaxed refers to samples that are inclusive for these mutations but may have others