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Fig. 3 | Genome Medicine

Fig. 3

From: Text-mining clinically relevant cancer biomarkers for curation into the CIViC database

Fig. 3

a A Shiny-based web interface allows for easy exploration of the CIViCmine biomarkers with filters and overview pie charts. The main table shows the list of biomarkers and links to a subsequent table showing the list of supporting sentences. b The entirety of PubMed and PubMed Central Open Access subset were processed to extract 87,412 biomarkers distributed between the four different evidence types shown. c Protein-coding variants extracted for each evidence item are compared against somatic variants in COSMIC and > 1% prevalence SNPs in dbSNP

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