Fig. 2From: An integrative functional genomics framework for effective identification of novel regulatory variants in genome–phenome studiesSNP annotation and enrichment analysis in different types of functional data. a Proportions of SNPs from the PheWAS Catalog in different types of functional data. b Proportions of SNPs from the GWAS Catalog in different types of functional data. c Enrichment analysis for different types of functional data with the variants from the 1000 Genomes project as the background. FC fold-change. d Proportions of SNPs in different types of functional data after linkage disequilibrium (LD) extension by the P value reported in the PheWAS CatalogBack to article page