From: ISOWN: accurate somatic mutation identification in the absence of normal tissue controls
Features | Type of value | Internal or external | Number of distinct values |
---|---|---|---|
COSMIC_CNT | Integer | External database | Numeric |
ExAC | Boolean | External database | 2 |
dbSNP | Boolean | External database | 2 |
Mutation assessor | Categorical | External database | 5 |
PolyPhen-2 | Categorical | External database | 3 |
Sequence context | Categorical | Human genome | 64 |
Sample frequency (SF) | Double | Internal data | Numeric |
Variant allele frequency | Double | Internal data | Numeric |
Flanking regions | Double | Internal data | Numeric |
Substitution pattern | Categorical | Internal data | 6 |