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Table 1 SNPs with allele-specific expression in the LA

From: Allele-specific expression in the human heart and its application to postoperative atrial fibrillation and myocardial ischemia

SNP

Gene

Chr

Location

Samples

Reads

REF/ALTā€‰+ā€‰REF

FDR-adj. p value

rs3810232

RPS9

19

54,704,760

35

33,337

0.05

<10ā€“300

rs111794229

TIMP3

22

33,257,378

23

9569

0.89

<10ā€“300

rs202118461

LYRM5

12

25,357,576

32

3253

0.86

<10ā€“300

rs112332443

TGOLN2

2

85,545,951

15

2395

0.95

2ā€‰Ć—ā€‰10ā€“293

rs422733

COL4A2

13

111,164,614

33

2714

0.92

2ā€‰Ć—ā€‰10ā€“291

rs3832425

SSR1

6

7,289,415

31

2281

0.92

5ā€‰Ć—ā€‰10ā€“267

rs1046138

PKP2

12

32,944,162

32

9156

0.84

1ā€‰Ć—ā€‰10ā€“253

rs3210020

PDLIM1

10

96,997,440

11

1746

0.89

4ā€‰Ć—ā€‰10ā€“233

rs1051336

HLA-DRA

6

32,412,592

19

10,132

0.74

8ā€‰Ć—ā€‰10ā€“232

rs9512

ABLIM3

5

148,639,762

30

2,580

0.22

8ā€‰Ć—ā€‰10ā€“204

  1. The table shows the ten SNPs with the most significant ASE in the LA samples (nā€‰=ā€‰5688), the gene they are located within, the genomic location, number of heterozygous samples and reads overlapping the SNP available for ASE calling, the REF/ALTā€‰+ā€‰REF ratio, and the FDR-adjusted p value for ASE