From: Assessing the reproducibility of exome copy number variations predictions
Dataset | XHMM | CoNIFER | CONTRA | EXCAVATOR |
---|---|---|---|---|
BI (167) | Oa | O | –b | O |
WUGSC (116) | O | O | – | O |
BI GIH (48) | O | O | O | O |
ClinSeq® (54) | O | O | O | O |
Sample size analysis (ClinSeq® in triplicates by random sampling) | ||||
10 | O | O | – | O |
30 | O | O | – | O |
75 | O | O | – | O |
100 | O | O | – | O |
300 | O | O | – | O |
Capture kit analysis (48 samples from ClinSeq® in triplicates by random sampling) | ||||
SS HAE | O | O | – | O |
SS ICGC | O | O | – | O |
TruSeq v2 | O | O | – | O |
Mix capturec | O | O | – | O |