Tumor type
|
Virus
|
Number of samples
|
Sequencing technology
|
Number of integration sites
|
Accession number
|
Reference
|
---|
Hepatocellular carcinoma | HBV | 13 | WGS | 20a
| ERP001196 | [7] |
Hepatocellular carcinoma | HBV | 4 | RNA-seq | 11 | SRP023539 | [11] |
Merkel cell carcinoma | MCV | 2 | TS | 3 | NA | [31] |
-
aTwo virus insertion loci were considered as one if the genomic distance between them was less than 10Â bp. HBV, hepatitis B virus; MCV, Merkel cell polyomavirus; NA, no accession number is associated with the project; RNA-seq, whole transcriptome sequencing; TS, targeted sequencing; WGS, whole genome sequencing.