Table 3 Rankings of experimentally validated regulatory variants from three real world analyses for SuRFR, GWAVA and CADD
From: SuRFing the genomics wave: an R package for prioritising SNPs by functionality
| Â | Total number of variants | SuRFR ranking of functional variant | GWAVA ranking of functional variant | CADD ranking of functional variant |
|---|---|---|---|---|
SORT1 | 22 | 1st out of 22 | 6th out of 22 | 20th out of 22 |
EGR2 | 35 | 1st out of 35 | 2nd out of 35 | 18th out of 35 |
TCF7L2 | 6 | 2nd out of 6 | 2nd out of 6 | 2nd out of 6 |