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Table 1 Microarray datasets used in this study

From: Transcriptional dissection of pancreatic tumors engrafted in mice

 

Pancreas

Liver

 

Samples

GEO accession

Samples

GEO accession

PDX models

53

GSE9599[21], GSE51798

42

GSE6465[26]

Cell lines

41 (11 repeated)

GSE17891[25], GSE21654[24]

32 (5 repeated)

GSE6465[26], GSE36133[27]

Primary Tumors

53

GSE15471[22], GSE16515[23], GSE51798

108

GSE6465[26], GSE6222[28], GSE9843[29–31]

  1. Number of samples and GEO accession for all datasets used in the study to create gene expression spaces. The new dataset that was generated in this study is indicated in bold.