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Table 1 Genes targeted for capture and sequencing

From: Next generation sequence analysis for mitochondrial disorders

OXPHOS subunits

OXPHOS assembly factors

Enzymes

Transcription/translation

Carriers

mtDNA maintenance, mitochondria biogenesis/dynamics

Known genes for mitochondrial disorders

     

COX4I2, COX6B1, NDUFA1, NDUFA2, NDUFA11, NDUFS1, NDUFS2, NDUFS3, NDUFS4, NDUFS6, NDUFS7, NDUFS8, NDUFV1, NDUFV2, SDHA, SDHB, SDHC, SDHD, UQCRB, UQCRQ

ATPAF2, BCS1L, C20orf7, COX10, COX15, NDUFAF1NDUFAF3, NDUFAF4, SCO1, SCO2, SURF1

ABCB7, ACAT1, APTX, ASS1, BCKDHA, BCKDHB, CABC1, COQ9, CYCS, DBT, DLAT, DLD, ETHE1, FH, FXN, GFER, HADH, HADHA, HADHB, HMGCL, HMGCS2, MCCC2, OXCT1, PC, PCK2, PDHA1, PDHB, PDHX, PDSS1, PDSS2, PPM1B, PPM2C, PREPL, TAZ

ATXN7, DARS2, GFM1, LRPPRC, MRPS16, MRPS22, PUS1, RARS2, TSFM, TUFM

DNAJC19, SLC25A13, SLC25A15, SLC25A19, SLC25A20, SLC25A22, SLC25A3, SLC25A4, SLC3A1, TIMM8A

c10orf2, DGUOK, DNM1L, ETFA, ETFB, ETFDH, HSPD1, MFN2, MPV17, OPA1, PINK1, POLG2, RRM2B, SPG7, SUCLA2, SUCLG1, TK2, TYMP, WFS1

Candidate genes for mitochondrial disorders

     

ACOT7, AMACR, ATP5A1, ATP5B, ATP5C1, ATP5D, ATP5E, ATP5F1, ATP5G1, ATP5G2, ATP5G3, ATP5H, ATP5I, ATP5J, ATP5J2, ATP5O, ATP5S, ATPIF1, BCL2L13, C10orf65, C14orf2, COX4I1, COX5A, COX5B, COX6A1, COX6A2, COX6C, COX7A1, COX7A2, COX7B, COX7B2, COX7C, COX8A, COX8C, CYC1, DCI, FOXRED1, GAD1, GBAS, GNPAT, GPAM, HPDL, IVD, MGST3, MRRF, NDUFA10, NDUFA12, NDUFA13, NDUFA3, NDUFA4, NDUFA5, NDUFA6, NDUFA8, NDUFA9, NDUFAB1, NDUFB1, NDUFB10, NDUFB11, NDUFB2, NDUFB3, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFB8, NDUFB9, NDUFC1, NDUFC2, NDUFS5, NDUFV3, NIPSNAP1, NIPSNAP3A, NIPSNAP3B, NPL, PAH, PHYH, PNPT1, PRO1853, RNMTL1, TMEM22, UQCR, UQCRC1, UQCRC2, UQCRFS1, UQCRH, USMG5

ATPAF1, COX11, COX17, COX18, COX19, ECSIT

COQ10B, COQ3, COQ4, COQ5, COQ6, COQ7, PDK1, PDK2, PDK3, PDK4, PDP2, PDPR

AARS2, CARS2, FARS2, IARS2, KARS, LARS2, MARS2, MRPL1, MRPL10, MRPL11, MRPL12, MRPL13, MRPL14, MRPL15, MRPL16, MRPL17, MRPL18, MRPL19, MRPL2, MRPL20, MRPL21, MRPL22, MRPL23, MRPL24, MRPL27, MRPL28, MRPL3, MRPL30, MRPL32, MRPL33, MRPL34, MRPL35, MRPL36, MRPL37, MRPL38, MRPL39, MRPL4, MRPL40, MRPL41, MRPL42, MRPL43, MRPL44, MRPL45, MRPL46, MRPL47, MRPL49, MRPL50, MRPL51, MRPL52, MRPL53, MRPL54, MRPL55, MRPL9, MRPS10, MRPS11, MRPS12, MRPS14, MRPS15, MRPS17, MRPS18A, MRPS18B, MRPS18C, MRPS2, MRPS21, MRPS23, MRPS24, MRPS25, MRPS26, MRPS27, MRPS28, MRPS29, MRPS30, MRPS31, MRPS33, MRPS34, MRPS35, MRPS36, MRPS5, MRPS6, MRPS7, MRPS9, MTG1, NARS2, NRF1, PARS2, RSPH9, SARS2, TARS2, TFAM, TFB1M, TFB2M, WARS2, YARS2

GRPEL1, HSPA9, PAM16, SAMM50, SLC25A1, SLC25A10, SLC25A11, SLC25A12, SLC25A14, SLC25A16, SLC25A17, SLC25A18, SLC25A2, SLC25A21, SLC25A23, SLC25A24, SLC25A25, SLC25A26, SLC25A29, SLC25A30, SLC25A31, SLC25A32, SLC25A33, SLC25A34, SLC25A35, SLC25A36, SLC25A38, SLC25A39, SLC25A40, SLC25A42, SLC25A43, SLC25A44, SLC25A45, SLC25A46, SLC25A5, SLC25A6, TIMM10, TIMM13, TIMM17A, TIMM17B, TIMM22, TIMM23, TIMM44, TIMM50, TIMM8B, TIMM9, TOMM20, TOMM22, TOMM34, TOMM40, TOMM40L, TOMM7, TOMM70A, UCP1, UCP2, UCP3, VDAC1, VDAC2, VDAC3

HSPE1, MFN1,